Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_27.138

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_27.138
Family
Jumonji

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

914534 Score: 1

Arabidopsis thaliana

AT4G21430.1 Score: 1

Populus trichocarpa

197090 Score: 1

Expression data

Expressed Sequence Tags

At.18334
Arabidopsis thaliana IBM1 (INCREASE IN BONSAI METHYLATION 1); histone demethylase(H3-K9 specific) / transcription factor (IBM1) mRNA, complete cds /cds=p(1,3084) /gb=NM_111640
At.32630
Arabidopsis thaliana B160; transcription factor (B160) mRNA, complete cds /cds=p(1,2784) /gb=NM_118263
At.42102
Arabidopsis thaliana transcription factor (AT1G11950) mRNA, complete cds /cds=p(1,2628) /gb=NM_101067
Hv.4909
BJ484812 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves Hordeum vulgare subsp. spontaneum cDNA clone bah56d17 3', mRNA sequence /clone=bah56d17 /clone_end=3' /gb=BJ484812
Mtr.14337
s13dNF71F01GS015_467014 Germinating Seed Medicago truncatula cDNA, mRNA sequence /gb=CX541853
Ppa.19248
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_118936) mRNA, partial cds /cds=p(1,1998) /gb=XM_001757080
Vvi.11982
CAP0006_IVR_F05 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0006_IVR_F05 3', mRNA sequence /clone=CAP0006_IVR_F05 /clone_end=3' /gb=CF519154

Domain Architecture

JmjC PF02373 evm.TU.supercontig_27.138
DomainStartEndBit scoreE-value
JmjC44655610.68.7e-05

Sequences