Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_289.4

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_289.4
Family
BSD

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

894683 Score: 1

Arabidopsis thaliana

AT1G26300.1 Score: 1

Physcomitrella patens

139793 Score: 1
184063 Score: 1

Carica papaya

evm.TU.supercontig_289.4 Score: 1
evm.TU.supercontig_3.231 Score: 1

Populus trichocarpa

564448 Score: 1

Expression data

Expressed Sequence Tags

At.26503
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-05-E04 /cds=p(13,441) /gb=AK176184
At.27528
Arabidopsis thaliana unknown protein (AT1G69030) mRNA, complete cds /cds=p(1,954) /gb=NM_105574
Hv.22808
BES1824106m16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010M166 5-PRIME, mRNA sequence /clone=MPMGp2010M16106 /clone_end=5' /gb=CK125132
Mtr.10541
MTYD165TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256855
Vvi.5990
WIN032.C21_P16 Cab Sauv seed normalized (WIN03) Vitis vinifera cDNA clone WIN032_P16 3', mRNA sequence /clone=WIN032_P16 /clone_end=3' /gb=EC928383

Domain Architecture

BSD PF03909 evm.TU.supercontig_289.4
DomainStartEndBit scoreE-value
BSD14120163.39e-16

Sequences