Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_30.116

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_30.116
Family
PLATZ

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

313743 Score: 1

Arabidopsis thaliana

AT1G31040.1 Score: 1

Ostreococcus lucimarinus

29623 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g45540.1 Score: 1

Ostreococcus tauri

36702 Score: 1

Populus trichocarpa

757009 Score: 1

Sorghum bicolor

4755537 Score: 1

Selaginella moellendorffii

4832 Score: 1

Vitis vinifera

GSVIVP00030128001 Score: 1

Zea mays

GRMZM2G017882_P01 Score: 1

Chlamydomonas reinhardtii

106059 Score: 1

Expression data

Expressed Sequence Tags

At.71353
Arabidopsis thaliana unknown protein (AT1G31040) mRNA, complete cds /cds=p(110,841) /gb=NM_102842
Os.8770
Oryza sativa Japonica Group cDNA clone:J033148H01, full insert sequence /cds=p(249,974) /gb=AK103838
Os.8903
Oryza sativa Japonica Group cDNA clone:J023090I20, full insert sequence /cds=p(149,934) /gb=AK111793
Pba.5812
WS02547.C21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02547_O23 3', mRNA sequence /clone=WS02547_O23 /clone_end=3' /gb=DT491510
Pba.910
WS0255.B21_H09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_H09 3', mRNA sequence /clone=WS0255_H09 /clone_end=3' /gb=CV244729
Ppa.12983
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_228346) mRNA, partial cds /cds=p(911,1366) /gb=XM_001785899
Pth.5812
WS02547.C21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02547_O23 3', mRNA sequence /clone=WS02547_O23 /clone_end=3' /gb=DT491510
Pth.910
WS0255.B21_H09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_H09 3', mRNA sequence /clone=WS0255_H09 /clone_end=3' /gb=CV244729
Ptp.11954
T008B09 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830426
Vvi.20531
WIN0522.C21_J16 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0522_J16 3', mRNA sequence /clone=WIN0522_J16 /clone_end=3' /gb=EC941405

Domain Architecture

PLATZ PF04640 evm.TU.supercontig_30.116
DomainStartEndBit scoreE-value
PLATZ38147248.22e-71

Sequences