Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_35.31

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_35.31
Family
E2F-DP
3D structure (top 5)
1CF7 2AZE
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

485177 Score: 1

Arabidopsis thaliana

AT3G48160.1 Score: 1
AT3G48160.2 Score: 0.937

Oryza sativa subsp. japonica

LOC_Os02g50630.1 Score: 1

Populus trichocarpa

570039 Score: 1

Sorghum bicolor

4897135 Score: 1

Vitis vinifera

GSVIVP00016169001 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.99
GRMZM2G060000_P02 Score: 0.99

Expression data

Expressed Sequence Tags

At.35736
Arabidopsis thaliana clone RAFL15-19-A14 (R20743) putative DP-E2F protein 1 (At3g48160) mRNA, complete cds /cds=p(311,1522) /gb=BT004258

Domain Architecture

E2F_TDP PF02319 evm.TU.supercontig_35.31
DomainStartEndBit scoreE-value
E2F_TDP1580111.72.4e-30
E2F_TDP151231131.42.8e-36

Sequences