Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_36.176

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_36.176
Family
HB
3D structure (top 5)
1NK2 2E1O 2CUE 1JGG 2DMQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Populus trichocarpa

830237 Score: 1

Sorghum bicolor

147812 Score: 1

Expression data

Expressed Sequence Tags

At.19698
Arabidopsis thaliana putative homeobox-leucine zipper protein ATHB-5 (At5g65310) mRNA, complete cds /cds=p(398,1336) /gb=AY074293
Pba.9592
WS02549.C21_O11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_O11 3', mRNA sequence /clone=WS02549_O11 /clone_end=3' /gb=DT492190
Pth.12047
M112B12.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone M112B12 5', mRNA sequence /clone=M112B12 /clone_end=5' /gb=DN494600
Vvi.14123
CAB20001_IIa_Fa_G03 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20001_IIa_Fa_G03 5', mRNA sequence /clone=CAB20001_IIa_Fa_G03 /clone_end=5' /gb=CF207267

Domain Architecture

Homeobox PF00046 evm.TU.supercontig_36.176
DomainStartEndBit scoreE-value
Homeobox5911374.15e-19
HALZ11415857.84.1e-14

Sequences