Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_43.84

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_43.84
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488541 Score: 1

Arabidopsis thaliana

AT3G02990.1 Score: 1

Populus trichocarpa

242375 Score: 1

Expression data

Expressed Sequence Tags

Mtr.22152
NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
Pba.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Ppa.23943
CAYY25595.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY25595 5', mRNA sequence /clone=CAYY25595 /clone_end=5' /gb=FC349157
Pth.5303
WS02553.C21_E01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02553_E01 3', mRNA sequence /clone=WS02553_E01 /clone_end=3' /gb=DT493055
Sbi.9715
PIC1_29_H03.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM323976

Domain Architecture

HSF_DNA-bind PF00447 evm.TU.supercontig_43.84
DomainStartEndBit scoreE-value
HSF_DNA-bind22192193.94.5e-55

Sequences