Gene model: evm.TU.supercontig_50.71

Species: Carica papaya Gene model evm.TU.supercontig_50.71 Family MADS 3D structure (top 5) 1K6O 1MNM 1N6J 1EGW 1HBX
	PDB entry: 1K6O 1MNM 1N6J 1EGW 1HBX

• ASGPB
• Phytozome

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

486333 Score: 1

Arabidopsis thaliana

AT3G58780.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g10504.1 Score: 1

Populus trichocarpa

660583 Score: 1
758707 Score: 1

Sorghum bicolor

4750740 Score: 1

Zea mays

GRMZM2G059402_P01 Score: 1
GRMZM2G059402_P02 Score: 1

• NCBI EST Profile Viewer (UniGene: At.28088)
• NCBI EST Profile Viewer (UniGene: At.284)
• NCBI EST Profile Viewer (UniGene: At.2918)
• NCBI EST Profile Viewer (UniGene: Hv.18905)
• NCBI EST Profile Viewer (UniGene: Hv.20740)
• NCBI EST Profile Viewer (UniGene: Hv.20746)
• NCBI EST Profile Viewer (UniGene: Mtr.14585)
• NCBI EST Profile Viewer (UniGene: Mtr.18784)
• NCBI EST Profile Viewer (UniGene: Os.2345)
• NCBI EST Profile Viewer (UniGene: Os.28021)
• NCBI EST Profile Viewer (UniGene: Os.48040)
• NCBI EST Profile Viewer (UniGene: Pth.12580)
• NCBI EST Profile Viewer (UniGene: Pth.12882)
• NCBI EST Profile Viewer (UniGene: Vvi.135)
• NCBI EST Profile Viewer (UniGene: Vvi.14423)
• NCBI EST Profile Viewer (UniGene: Vvi.5818)
• NCBI EST Profile Viewer (UniGene: Vvi.7957)

At.28088

Arabidopsis thaliana AG (AGAMOUS); transcription factor (AG) mRNA, partial cds /cds=p(507,1265) /gb=NM_118013

At.284

Arabidopsis thaliana clone RAFL15-25-E19 (R20569) putative floral homeodomain transcription factor (AGL5) (At2g42830) mRNA, partial cds /cds=p(1,548) /gb=BT003841

At.2918

Arabidopsis thaliana STK (SEEDSTICK) (STK) mRNA, complete cds /cds=p(188,958) /gb=NM_001084895

Hv.18905

HVSMEk0005M04f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0005M04f, mRNA sequence /clone=HVSMEk0005M04f /gb=BG415259

Hv.20740

Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2) mRNA, complete cds /cds=p(90,788) /gb=AF486649

Hv.20746

Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1) mRNA, complete cds /cds=p(139,843) /gb=AF486648

Mtr.14585

EST669641 MTUS Medicago truncatula cDNA clone MTUS-14A10, mRNA sequence /clone=MTUS-14A10 /gb=CF068920

Mtr.18784

EST635183 GLSD Medicago truncatula cDNA clone pGLSD-26B15, mRNA sequence /clone=pGLSD-26B15 /gb=CA857928

Os.2345

Oryza sativa Japonica Group cDNA clone:J023050A03, full insert sequence /cds=p(66,878) /gb=AK070425

Os.28021

Oryza sativa Japonica Group cDNA clone:J023065L09, full insert sequence /cds=p(197,994) /gb=AK070958

Os.48040

Oryza sativa Japonica Group mRNA for transcription factor OsMADS58, complete cds /cds=p(105,923) /gb=AB232157

Pth.12580

UM95TA01 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU883614

Pth.12882

UM83TF04.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone UM83TF04 5', mRNA sequence /clone=UM83TF04 /clone_end=5' /gb=DN501305

Vvi.135

Vitis vinifera MAD-box transcripion factor (mads1) mRNA, complete cds /cds=p(200,877) /gb=AF265562

Vvi.14423

S6B03747 Fruits 7-9 mm (VvS6) Vitis vinifera cDNA clone S6B03747, mRNA sequence /clone=S6B03747 /gb=EE089059

Vvi.5818

Vitis vinifera MADS-box protein 5 (MADS5) mRNA, complete cds /cds=p(71,742) /gb=AF373604

Vvi.7957

WIN1143.C21_A16 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1143_A16 3', mRNA sequence /clone=WIN1143_A16 /clone_end=3' /gb=EC991606

protein sequence
transcript sequence