Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_55.67

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_55.67
Family
HB
3D structure (top 5)
1ZQ3 2VI6 1B72 1B8I 1NK2
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481105 Score: 1

Arabidopsis thaliana

AT2G22430.1 Score: 1
AT5G65310.1 Score: 1

Populus trichocarpa

217381 Score: 1

Vitis vinifera

GSVIVP00007830001 Score: 1

Zea mays

GRMZM2G056600_P01 Score: 1
GRMZM2G068318_P01 Score: 1

Expression data

Expressed Sequence Tags

Mtr.14033
EST649151 KV3 Medicago truncatula cDNA clone KV3-53O16, mRNA sequence /clone=KV3-53O16 /gb=CB892182
Mtr.17800
Medicago truncatula clone MTYF9_FA_FB_FC1G-H-4 unknown mRNA /cds=m(1,800) /gb=BT051961
Mtr.3228
Medicago truncatula clone MTYFD_FE_FF_FG1G-K-20 unknown mRNA /cds=p(123,1031) /gb=BT052385
Pba.9592
WS02549.C21_O11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02549_O11 3', mRNA sequence /clone=WS02549_O11 /clone_end=3' /gb=DT492190
Pth.12047
M112B12.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone M112B12 5', mRNA sequence /clone=M112B12 /clone_end=5' /gb=DN494600
Pth.9592
Populus trichocarpa clone WS0126_C14 unknown mRNA /cds=p(603,1589) /gb=EF147945
Ptp.11361
X012G03 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU894651
Vvi.14123
CAB20001_IIa_Fa_G03 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20001_IIa_Fa_G03 5', mRNA sequence /clone=CAB20001_IIa_Fa_G03 /clone_end=5' /gb=CF207267

Domain Architecture

Homeobox PF00046 evm.TU.supercontig_55.67
DomainStartEndBit scoreE-value
Homeobox5811274.63.5e-19
HALZ11315775.91.4e-19

Sequences