Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_78.13

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_78.13
Family
HB
3D structure (top 5)
2DMN 1DU6 1B72 1PUF 1LE8
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491396 Score: 1

Arabidopsis thaliana

AT4G32980.1 Score: 1

Populus trichocarpa

778787 Score: 1

Vitis vinifera

GSVIVP00032172001 Score: 1

Zea mays

GRMZM2G083051_P01 Score: 1
GRMZM2G083051_P02 Score: 1
GRMZM2G161435_P01 Score: 1
GRMZM2G161435_P02 Score: 1
GRMZM2G161435_P03 Score: 1

Expression data

Expressed Sequence Tags

At.76
Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds /cds=p(708,2129) /gb=AY072174
Mtr.22349
META209TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474128

Domain Architecture

POX PF07526 evm.TU.supercontig_78.13
DomainStartEndBit scoreE-value
POX13125287.64.3e-23
Homeobox289347-3.10.024

Sequences