Gene model: evm.TU.supercontig_84.116

Species: Carica papaya Gene model evm.TU.supercontig_84.116 Family CCAAT 3D structure (top 5) 1ID3 2F8N 2JSS 2NQB 1Q9C
	PDB entry: 1ID3 2F8N 2JSS 2NQB 1Q9C 1TZY 1F66 1JFI 1N1J 2BYK 1F1E 1KU5 1B67

• ASGPB
• Phytozome

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

888122 Score: 1
916372 Score: 1

Carica papaya

evm.TU.supercontig_84.116 Score: 1
evm.TU.supercontig_9.140 Score: 1

Arabidopsis thaliana

AT1G54690.1 Score: 1
AT1G08880.1 Score: 0.962

Carica papaya

evm.TU.supercontig_84.116 Score: 1
evm.TU.supercontig_97.83 Score: 1

Coccomyxa sp. C-169

32173 Score: 1
45117 Score: 1

Carica papaya

evm.TU.supercontig_84.116 Score: 1
evm.TU.supercontig_9.140 Score: 1

Carica papaya

evm.TU.supercontig_84.116 Score: 1
evm.TU.supercontig_9.140 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g51200.1 Score: 1
LOC_Os12g34510.1 Score: 1

Populus trichocarpa

729700 Score: 1

Selaginella moellendorffii

170948 Score: 1
73637 Score: 1

Carica papaya

evm.TU.supercontig_84.116 Score: 1
evm.TU.supercontig_9.140 Score: 1

Carica papaya

evm.TU.supercontig_84.116 Score: 1
evm.TU.supercontig_97.83 Score: 1

Zea mays

GRMZM2G099066_P02 Score: 1

• NCBI EST Profile Viewer (UniGene: At.10837)
• NCBI EST Profile Viewer (UniGene: At.71450)
• NCBI EST Profile Viewer (UniGene: Hv.23038)
• NCBI EST Profile Viewer (UniGene: Mtr.1354)
• NCBI EST Profile Viewer (UniGene: Mtr.7576)
• NCBI EST Profile Viewer (UniGene: Os.4755)
• NCBI EST Profile Viewer (UniGene: Pba.383)
• NCBI EST Profile Viewer (UniGene: Ppa.302)
• NCBI EST Profile Viewer (UniGene: Ppa.7722)
• NCBI EST Profile Viewer (UniGene: Pth.11515)
• NCBI EST Profile Viewer (UniGene: Pth.358)
• NCBI EST Profile Viewer (UniGene: Pth.383)
• NCBI EST Profile Viewer (UniGene: Pth.5023)
• NCBI EST Profile Viewer (UniGene: Ptp.6653)
• NCBI EST Profile Viewer (UniGene: Ptp.6807)
• NCBI EST Profile Viewer (UniGene: Vvi.15876)
• NCBI EST Profile Viewer (UniGene: Vvi.15880)
• NCBI EST Profile Viewer (UniGene: Vvi.2066)
• NCBI EST Profile Viewer (UniGene: Vvi.7584)
• NCBI EST Profile Viewer (UniGene: Vvi.9328)

At.10837

Arabidopsis thaliana At1g54690/T22H22_12 mRNA, complete cds /cds=p(82,510) /gb=AF411788

At.71450

Arabidopsis thaliana G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA binding (G-H2AX/GAMMA-H2AX/H2AXA/HTA5) mRNA, complete cds /cds=p(125,553) /gb=NM_100760

Hv.23038

HVSMEk0002J15f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0002J15f, mRNA sequence /clone=HVSMEk0002J15f /gb=BG414469

Mtr.1354

MEUB595TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=GE347326

Mtr.7576

MEUAV15TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence /clone_end=3' /gb=GE350929

Os.4755

CR293459 Oryza sativa library (Han B) Oryza sativa cDNA clone y792e04p5, mRNA sequence /clone=y792e04p5 /gb=CR293459

Pba.383

WS01124.BR_N24 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_N24 5', mRNA sequence /clone=WS01124_N24 /clone_end=5' /gb=DT496898

Ppa.302

Physcomitrella patens subsp. patens histone H2A (HTA1511) mRNA, complete cds /cds=p(198,620) /gb=XM_001762424

Ppa.7722

Physcomitrella patens subsp. patens histone H2A (HTA1505) mRNA, complete cds /cds=p(90,512) /gb=XM_001785164

Pth.11515

F003P52.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F003P52 3', mRNA sequence /clone=F003P52 /clone_end=3' /gb=CK090413

Pth.358

WS0111.B21_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_L14 3', mRNA sequence /clone=WS0111_L14 /clone_end=3' /gb=CV246234

Pth.383

Populus trichocarpa clone WS0124_P12 unknown mRNA /cds=p(63,491) /gb=EF147777

Pth.5023

WS01116.B21_N15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01116_N15 3', mRNA sequence /clone=WS01116_N15 /clone_end=3' /gb=CV247051

Ptp.6653

N067F03 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N067F03 5', mRNA sequence /clone=N067F03 /clone_end=5' /gb=CK110521

Ptp.6807

T082C12.5pR Populus shoot meristem cDNA library Populus tremula x Populus tremuloides cDNA clone T082C12 5', mRNA sequence /clone=T082C12 /clone_end=5' /gb=DN499732

Vvi.15876

SBB03149 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB03149, mRNA sequence /clone=SBB03149 /gb=EE103393

Vvi.15880

CSECS095A02_POSn0036 CabSau Normalised Berry Postveraison Stage 36 (POSn0036) Vitis vinifera cDNA clone CSECS095A02 3', mRNA sequence /clone=CSECS095A02 /clone_end=3' /gb=CF415313

Vvi.2066

WIN1122.C21_K13 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1122_K13 3', mRNA sequence /clone=WIN1122_K13 /clone_end=3' /gb=EC984691

Vvi.7584

WIN0213.TB24_F07 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN0213_F07 3', mRNA sequence /clone=WIN0213_F07 /clone_end=3' /gb=EC926739

Vvi.9328

WIN0415.C21_C05 Cab Sauv pericarp normalized (WIN04) Vitis vinifera cDNA clone WIN0415_C05 3', mRNA sequence /clone=WIN0415_C05 /clone_end=3' /gb=EC932028

protein sequence
transcript sequence