Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_90.3

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_90.3
Family
Jumonji
3D structure (top 5)
2OX0 2W2I
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

916732 Score: 1

Arabidopsis thaliana

AT5G46910.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os10g42690.1 Score: 1

Populus trichocarpa

590053 Score: 1

Sorghum bicolor

5048994 Score: 1

Selaginella moellendorffii

81310 Score: 1

Vitis vinifera

GSVIVP00015690001 Score: 1

Zea mays

GRMZM2G180086_P01 Score: 1

Expression data

Expressed Sequence Tags

At.55411
Arabidopsis thaliana transcription factor jumonji (jmj) family protein (AT5G46910) mRNA, complete cds /cds=p(1,2124) /gb=NM_124062
Mtr.14171
EST508020 HOGA Medicago truncatula cDNA clone pHOGA-7O14 5' end, mRNA sequence /clone=pHOGA-7O14 /clone_end=5' /gb=BG646401

Domain Architecture

JmjN PF02375 evm.TU.supercontig_90.3
DomainStartEndBit scoreE-value
JmjN10213560.37.3e-15
JmjC28638468.91.9e-17
zf-C5HC248153453.48.5e-13

Sequences