Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_95.13

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_95.13
Family
HB
3D structure (top 5)
2D5V 2H8R 2K40 2DA3 2E1O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

913493 Score: 1

Arabidopsis thaliana

AT4G29940.1 Score: 1

Micromonas pusilla CCMP1545

59356 Score: 1

Micromonas sp. RCC299

63537 Score: 1

Ostreococcus lucimarinus

89717 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g05450.1 Score: 1

Ostreococcus tauri

36515 Score: 1

Physcomitrella patens

75761 Score: 1

Populus trichocarpa

826053 Score: 1

Sorghum bicolor

5054671 Score: 1

Selaginella moellendorffii

438630 Score: 1

Vitis vinifera

GSVIVP00009253001 Score: 1

Zea mays

GRMZM2G033138_P02 Score: 1

Expression data

Expressed Sequence Tags

At.19983
Arabidopsis thaliana homeodomain protein (PRHA) mRNA, complete cds /cds=p(215,2605) /gb=L21991
Ppa.17245
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170895) mRNA, complete cds /cds=p(1,2379) /gb=XM_001779822

Domain Architecture

PHD PF00628 evm.TU.supercontig_95.13
DomainStartEndBit scoreE-value
PHD24329863.29.8e-16
Homeobox50556326.23.3e-05

Sequences