Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_98.2

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_98.2
Family
HB
3D structure (top 5)
2R5Y 1NK2 1B8I 2H1K 1IG7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G79840.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g55549.1 Score: 1

Populus trichocarpa

817110 Score: 1

Vitis vinifera

GSVIVP00034385001 Score: 1

Expression data

Expressed Sequence Tags

At.19986
Arabidopsis thaliana putative homeobox protein GLABRA2 (At1g79840) mRNA, complete cds /cds=p(112,2355) /gb=AF360294
At.24442
Arabidopsis thaliana ANL2 (ANTHOCYANINLESS 2) (ANL2) mRNA, complete cds /cds=p(406,2118) /gb=NM_001125435
Vvi.17444
VV_PEd19f08.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV243133
Vvi.6342
VV_PEd19f08.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV243134

Domain Architecture

Homeobox PF00046 evm.TU.supercontig_98.2
DomainStartEndBit scoreE-value
Homeobox10616285.52e-22
START273500288.91.1e-83

Sequences