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NF-YC HMM
The NF-YC domain is characteristic of the CCAAT_HAP5 transcription factor family. The alignment for the ProDom family PD003659 was used as seed alignment.
CLUSTAL W (1.82) multiple sequence alignment
Q13952|CBFC_HUMAN-44-117 ------------PLARIKKIMKLDEDVK---MISAEAPVLFAKAAQIFIT
Q62725|CBFC_RAT-44-117 ------------PLARIKKIMKLDEDVK---MISAEAPVLFAKAAQIFIT
O73745|O73745_XENLA-42-115 ------------PLARIKKIMKLDEDVK---MISAEAPVLFAKAAQIFIT
Q7ZVY3|Q7ZVY3_BRARE-42-115 ------------PLARIKKIMKLDEDVK---MISAEAPVLFAKAAQIFIT
P70353|CBFC_MOUSE-44-117 ------------PLARIKKIMKLDEDVK---MISAEAPVLFAKGAQIFIT
O04033|O04033_ARATH-59-132 ------------PLARIKKIMKADEDVR---MISAEAPVVFARACEMFIL
Q9SNZ0|Q9SNZ0_ARATH-77-155 -------KKHSLPLARIKKIMKADEDVR---MISAEAPVVFARACEMFIL
Q8L4B2|Q8L4B2_ARATH-82-155 ------------PLARIKKIMKADEDVR---MISAEAPVVFARACEMFIL
Q9ZVL3|Q9ZVL3_ARATH-72-145 ------------PLARIKKIMKADEDVR---MISAEAPVVFARACEMFIL
O23636|O23636_ARATH-16-89 ------------PLARIKKIMKADEDVR---MISAEAPVIFAKACEMFIL
Q9SGU4|Q9SGU4_ARATH-16-89 ------------PLARIKKIMKADEDVR---MISAEAPVIFAKACEMFIL
Q8VY66|Q8VY66_ARATH-78-151 ------------PLARIKKIMKADEDVR---MISAEAPVIFAKACEMFIL
Q9FMV5|Q9FMV5_ARATH-80-163 ------------PLARIKKIMKADEDVR---MISAEAPILFAKACELFIL
Q9SMP0|Q9SMP0_ARATH-67-140 ------------PLARIKKIMKADEDVR---MISAEAPILFAKACELFIL
Q8LCG7|Q8LCG7_ARATH-78-150 ------------PLARIKKIMKADEDVR---MISAEAPVIFAKACEMFIL
Q9XE33|Q9XE33_ORYSA-92-165 ------------PLARIKKIMKADEDVR---MIAAEAPVVFARACEMFIL
Q02516|HAP5_YEAST-161-234 ------------PFARIRKVMKTDEDVK---MISAEAPIIFAKACEIFIT
O13381|O13381_NEUCR-84-167 -------KLHQLPLARIKKVMKADPEVK---MISAEAPILFAKGCDIFIT
Q96WN9|Q96WN9_TRIRE-84-167 -------KIHQLPLARIKKVMKADPEVK---MISAEAPILFAKGCDIFIT
O59849|O59849_ASPOR-83-166 -------KIHQLPLARIKKVMKADPEVK---MISAEAPILFAKGCDIFIT
P87092|P87092_EMENI-83-166 -------KIHQLPLARIKKVMKADPEVK---MISAEAPILFAKGCDVFIT
P79007|PHP5_SCHPO-98-185 EHDDQAVKTLHLPLARIKKVMKTDDDVK-NKMISAEAPFLFAKGSEIFIA
Q9W3V9|Q9W3V9_DROME-155-228 ------------PLARIKKIMKLDENAK---MIAGEAPLLFAKACEYFIQ
Q9FGP7|Q9FGP7_ARATH-56-129 ------------PLARIKKIMKADPDVH---MVSAEAPIIFAKACEMFIV
Q8SSZ4|Q8SSZ4_DICDI-272-345 ------------PLARIKKIMKSDKDVN---KISSEAPILFAKACEILIL
Q8SRY9|Q8SRY9_ENCCU-35-115 -------KDLNLPLARIKRLMKIEEGVR---MVASEVPVLFSMITEKFIE
Q8IL74|Q8IL74_PLAF7-36-118 ------------PISRIKKIMKEDDEIKSNQMVSADTPVLLAKACELFIM
Q9FGP6|Q9FGP6_ARATH-37-110 -----------FPISRIKRIMKFDPDVS---MIAAEAPNLLSKACEMFVM
Q9FF42|Q9FF42_ARATH-66-145 ---------THLPLSRVRKILKSDPEVK---KISCDVPALFSKACEYFIL
O17072|O17072_CAEEL-111-185 ------------PMARVKKIMRIDDDVR-NFMIASDAPIFMAQAAEFFIE
Q9FGP8|Q9FGP8_ARATH-64-144 -----------FPLTRIKKIMKSNPEVN---MVTAEAPVLISKACEMLIL
Q8LMX6|Q8LMX6_EEEEE-53-127 -----------LPISRVKNIIHAKEGGM---MLSADTPAFVTKLCELFVQ
Q8W099|Q8W099_ORYSA-45-118 ------------PMARLKKIVSSQKGNM---MMTFDMPAFLSKMCELFVQ
Q93VF0|Q93VF0_ORYSA-45-118 ------------PMARLKKIASSQKGNM---MMSFDMPAFLSKMCELFVQ
Q9NR33|DPE4_HUMAN-38-112 --------LSRLPLARVKALVKADPDVT---LAGQEAIFILARAAELFVE
Q9CQ36|DPE4_MOUSE-37-113 ------VRLSRLPLARVKALVKADPDVT---LAGQEAIFILARAAELFVE
Q8MSF2|Q8MSF2_DROME-52-127 -------KMTQLPLARIRNIMKLDPDLH---MANNEAVFIVAKAVELFIA
Q9W256|Q9W256_DROME-74-149 -------KMTQLPLARIRNIMKLDPDLH---MANNEAVFIVAKAVELFIA
Q9NAC5|Q9NAC5_CAEEL-34-109 ---------SQLPLGRVKKVVRMNPDVE---MLNNEALQLMAKAAELFIK
Q86HI1|Q86HI1_DICDI-80-151 ------------PVARIKRIMRCDKDVK---IISSDAVMLVAKSTEMFLD
P40096|NCB1_YEAST-51-125 ---------THFPPAKVKKIMQTDEDIG---KVSQATPVIAGRSLEFFIA
Q13448|Q13448_HUMAN-4-74 ---------------RIKKIMQTDEEIG---KVAAAVPVIISRALELFLE
Q14919|Q14919_HUMAN-3-86 --SKKKKYNARFPPARIKKIMQTDEEIG---KVAAAVPVIISRALELFLE
Q9D6N5|Q9D6N5_MOUSE-3-86 --SKKKKYNARFPPARIKKIMQTDEEIG---KVAAAVPVIISRALELFLE
Q7ZVI1|Q7ZVI1_BRARE-3-86 --SKKKKYNARFPPARIKKIMQTDEEIG---KVAAAVPVIISRALELFLE
Q9GSP1|Q9GSP1_DROME-3-86 --SKKKKYNARFPAGRIKKIMQSDEEIG---KVAQAVPVIISRTLELFVE
Q9W2E3|Q9W2E3_DROME-3-86 --SKKKKYNARFPAGRIKKIMQSDEEIG---KVAQAVPVIISRTLELFVE
Q8W0W6|Q8W0W6_MAIZE-2-80 ----RKKLGTRFPAARIKKIMQADEDVG---KIALAVPVLVSRSLELFLQ
Q8W0W7|Q8W0W7_ORYSA-2-80 ----RKKLGTRFPAARIKKIMQADEDVG---KIALAVPVLVSRALELFLQ
Q9LHG0|Q9LHG0_ARATH-2-83 ----RKKLDTRFPAARIKKIMQADEDVG---KIALAVPVLVSKSLELFLQ
Q9C7A7|Q9C7A7_ARATH-16-87 --------------ARIKKIMQADEDVG---KIALAVPVLVSKSLELFLQ
Q10315|YD63_SCHPO-22-98 ---------SRFPVARIKKIMQADQDVG---KVAQVTPVIMSKALELFMQ
Q8MLV5|Q8MLV5_DROME-1-66 --------------------MQSDEEIG---KVAQAVPVIISRTLELFVE
Q8SQT6|Q8SQT6_ENCCU-10-93 -------KLTRFPISRLKRIMQLNEDIG---KIGASVPVVASKAIEMFLT
Q20237|Q20237_CAEEL-68-140 -------------PTRIKKVMQSDEDIG---RMVQSVPVSIGRAMEHFAE
Q86G95|Q86G95_CAEEL-42-114 -------------PTRIKKVMQSDEDIG---RMVQSVPVSIGRAMEHFAE
Q9FHS0|Q9FHS0_ARATH-12-86 -----------FPIGRVKKIMKLDKDIN---KINSEALHVITYSTELFLH
Q9LGS9|Q9LGS9_ORYSA-167-241 -----------LPLGRVKRIIRVDRDIK---KVTNEAALLIAAATELFVG
Q9NRG0|CHR1_HUMAN-19-97 -----------LPLSRIRVIMKSSPEVS---SINQEALVLTAKATELFVQ
Q9JKP8|CHR1_MOUSE-19-97 -----------LPLSRIRVIMKSSPEVS---SINQEALVLTAKATELFVQ
Q9V452|Q9V452_DROME-20-101 -----------LPLSRVRTIMKSSMDTG---LITNEVLFLMTKCTELFVR
Q9LN09|Q9LN09_ARATH-104-188 -----EDAKIKFPMNRIRRIMRSDNSAP---QIMQDAVFLVNKATEMFIE
P27344|DPB3_YEAST-6-95 -----KEKAPVFPISKVKKIAKCDPEYV---ITSNVAISATAFAAELFVQ
Q851X6|Q851X6_EEEEE-206-257 -----------FPMARVRQIMRAEDATI---RPSNEAVFLINKATEIFLK
CONSENSUS EHSKKKKKMTRFPLARIKKIMKADEDVK---MISAEAPVLIAKACELFIQ
. : :
Q13952|CBFC_HUMAN-44-117 ELTLRAWIHTEDNKRRTLQRND------IAMAITKFDQFDFLIDI-----
Q62725|CBFC_RAT-44-117 ELTLRAWIHTEDNKRRTLQRND------IAMAITKFDQFDFLIDI-----
O73745|O73745_XENLA-42-115 ELTLRAWIHTEDNKRRTLQRND------IAMAITKFDQFDFLIDI-----
Q7ZVY3|Q7ZVY3_BRARE-42-115 ELTLRAWIHTEDNKRRTLQRND------IAMAITKFDQFDFLIDI-----
P70353|CBFC_MOUSE-44-117 ELTLRAWIRTEDNKRRPLQRND------IAMAITKFDQFDFLIDI-----
O04033|O04033_ARATH-59-132 ELTLRSWNHTEENKRRTLQKND------IAAAVTRTDIFDFLVDI-----
Q9SNZ0|Q9SNZ0_ARATH-77-155 ELTLRSWNHTEENKRRTLQKND------IAAAVTRTDIFDFLVDI-----
Q8L4B2|Q8L4B2_ARATH-82-155 ELTLRSWNHTEENKRRTLQKND------IAAAVTRTDIFDFLVDI-----
Q9ZVL3|Q9ZVL3_ARATH-72-145 ELTLRSWNHTEENKRRTLQKND------IAAAVTRTDIFDFLVDI-----
O23636|O23636_ARATH-16-89 ELTLRAWIHTEENKRRTLQKND------IAAAISRTDVFDFLVDI-----
Q9SGU4|Q9SGU4_ARATH-16-89 ELTLRAWIHTEENKRRTLQKND------IAAAISRTDVFDFLVDI-----
Q8VY66|Q8VY66_ARATH-78-151 ELTLRAWIHTEENKRRTLQKND------IAAAISRTDVFDFLVDI-----
Q9FMV5|Q9FMV5_ARATH-80-163 ELTIRSWLHAEENKRRTLQKND------IAAAITRTDIFDFLVDIVPREE
Q9SMP0|Q9SMP0_ARATH-67-140 ELTIRSWLHAEENKRRTLQKND------IAAAITRTDIFDFLVDI-----
Q8LCG7|Q8LCG7_ARATH-78-150 ELTLRAWIHTEENKRRTLQKND------IAAAISRTDV-DFLVDI-----
Q9XE33|Q9XE33_ORYSA-92-165 ELTHRGWAHAEENKRRTLQKSD------IAAAIARTEVFDFLVDI-----
Q02516|HAP5_YEAST-161-234 ELTMRAWCVAERNKRRTLQKAD------IAEALQKSDMFDFLIDV-----
O13381|O13381_NEUCR-84-167 ELTMRAWIHAEENKRRTLQRSD------IASALSKSDMFDFLIDIVPREE
Q96WN9|Q96WN9_TRIRE-84-167 ELTMRAWIHAEENKRRTLQRSD------IASALAKSDMFDFLIDIVPREE
O59849|O59849_ASPOR-83-166 ELTMRAWIHAEDNKRRTLQRSD------IAAALSKSDMFDFLIDIVPREE
P87092|P87092_EMENI-83-166 ELTMRAWIHAEDNKRRTLQRSD------IAAALSKSDMFDFLIDIVPREE
P79007|PHP5_SCHPO-98-185 ELTMRAWLHAKKNQRRTLQRSD------IANAVSKSEMYDFLIDI-----
Q9W3V9|Q9W3V9_DROME-155-228 ELTMHAWVHTEESRRRTLQRSD------IAQAIANYDQFDFLIDI-----
Q9FGP7|Q9FGP7_ARATH-56-129 DLTMRSWLKAEENKRHTLQKSD------ISNAVASSFTYDFLLDV-----
Q8SSZ4|Q8SSZ4_DICDI-272-345 EMTHRSWVHTEMNKRRTLQRTD------IINSLSRCETFDFLIDM-----
Q8SRY9|Q8SRY9_ENCCU-35-115 ELTLRAWINTEENKRRILQKSD------LTAAVKTSEMFDFLVYIVP---
Q8IL74|Q8IL74_PLAF7-36-118 ELTSNAWKYTEEGKRRTLQRQD------VVSAACKKDTFDFLIDLIPLED
Q9FGP6|Q9FGP6_ARATH-37-110 DLTMRSWLHAQESNRLTIRKSD------VDAVVSQTVIFDFLRD------
Q9FF42|Q9FF42_ARATH-66-145 EVTLRAWMHTQSCTRETIRRCD------IFQAVKNSGTYDFLIDRVPF--
O17072|O17072_CAEEL-111-185 EMTAMGWQYVSEARRRILQKAD------IASAVQKSDQFDFLID------
Q9FGP8|Q9FGP8_ARATH-64-144 DLTMRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDV-----
Q8LMX6|Q8LMX6_EEEEE-53-127 ELILRAWVCANSHNREIILGTD------IAEAITTTESYHFLANV-----
Q8W099|Q8W099_ORYSA-45-118 ELAVRAWASAQSHNRCIILDTD------IAKAIASTESYDFLVDI-----
Q93VF0|Q93VF0_ORYSA-45-118 ELAVRAWASAQSHNRCIILDTD------IAEAIASTESYDFLVDI-----
Q9NR33|DPE4_HUMAN-38-112 TIAKDAYCCAQQGKRKTLQRRD------LDNAIEAVDEFAFL--------
Q9CQ36|DPE4_MOUSE-37-113 TIAKDAYCCAQQGKRKTLQRRD------LDNAIEAVDEFAFL--------
Q8MSF2|Q8MSF2_DROME-52-127 SLSRESYTYTAQSKKKTIQKRD------VDMAISAVDSLLFL--------
Q9W256|Q9W256_DROME-74-149 SLSRESYTYTAQSKKKTIQKRD------VDMAISAVDSLLFL--------
Q9NAC5|Q9NAC5_CAEEL-34-109 ELSNAANQNAALEKRKTVQTKD------IDKAIKKTWAFAFLED------
Q86HI1|Q86HI1_DICDI-80-151 YLVKEAY--KSSGKKKTLQYKD------LASTIKGVDNLDFLSEI-----
P40096|NCB1_YEAST-51-125 LLVKKSGEMARGQGTKRITAEI------LKKTILNDEKFDFLR-------
Q13448|Q13448_HUMAN-4-74 SLLKKACQVTQSRNAKTMTTSH------LKQCIELEQQFDFLKDL-----
Q14919|Q14919_HUMAN-3-86 SLLKKACQVTQSRNAKTMTTSH------LKQCIELEQQFDFLKDL-----
Q9D6N5|Q9D6N5_MOUSE-3-86 SLLKKACQVTQSRNAKTMTTSH------LKQCIELEQQFDFLKDL-----
Q7ZVI1|Q7ZVI1_BRARE-3-86 SLLTKACDVTQSRNAKTMTTSH------LKQCIELEQQFDFLKDL-----
Q9GSP1|Q9GSP1_DROME-3-86 SLLTKTLRITNARNAKTLSPSH------MRQCIVSEKRFDFLKEL-----
Q9W2E3|Q9W2E3_DROME-3-86 SLLTKTLRITNARNAKTLSPSH------MRQCIVSEKRFDFLKEL-----
Q8W0W6|Q8W0W6_MAIZE-2-80 DLIDRTYEITLQSGAKTLNSFH------LKQCVKRYSSFDFL--------
Q8W0W7|Q8W0W7_ORYSA-2-80 DLIDRTYEITLQSGAKTLNSFH------LKQCVRRYSSFDFL--------
Q9LHG0|Q9LHG0_ARATH-2-83 DLCDRTYEITLERGAKTVSSLH------LKHCVERYNVFDFLREV-----
Q9C7A7|Q9C7A7_ARATH-16-87 DLCDRTYEITLERGAKTVSSLH------LKHCVERYNVFDFLREV-----
Q10315|YD63_SCHPO-22-98 SIIQESCKQTRLHQAKRVTVSH------LKHAVQSVEQFDFLQDI-----
Q8MLV5|Q8MLV5_DROME-1-66 SLLTKTLRITNARNAKTLSPSH------MRQCIVSEKRFDFLKEL-----
Q8SQT6|Q8SQT6_ENCCU-10-93 EIVGLTLKEARKKSSSRMSSEF------IIRATESDPKFAFLKNMEQFKN
Q20237|Q20237_CAEEL-68-140 KFLQAAAEATQFTSSKTLNPQH------MKQAVLNTPHFSFLESV-----
Q86G95|Q86G95_CAEEL-42-114 KFLQAAAEATQFTSSKTLNPQH------MKQAVLNTPHFSFLESV-----
Q9FHS0|Q9FHS0_ARATH-12-86 FLAEKSAVVTAEKKRKTVNLDHL-----RIAVKRHQPTSDFLLD------
Q9LGS9|Q9LGS9_ORYSA-167-241 SLAAGAHRAASRRGRRAVRAVHV-----RAAAREHRPTADFLLD------
Q9NRG0|CHR1_HUMAN-19-97 CLATYSYRHGSGKEK-KV---LTY--SDLANTAQQSETFQFLADILPKK-
Q9JKP8|CHR1_MOUSE-19-97 YLATCSYRHGSGKAK-KA---LTY--SDLASTAEDSETLQFLADILPKK-
Q9V452|Q9V452_DROME-20-101 HLAGAAYTEEFGQRPGEA---LKY--EHLSQVVNKNKNLEFLLQIVPQKI
Q9LN09|Q9LN09_ARATH-104-188 RFSEEAY-DSSVKDKKKF---IHY--KHLSSVVSNDQRYEFLADSVPEK-
P27344|DPB3_YEAST-6-95 NLVEESLVLAQLNSKGKTSLRLSL--NSIEECVEKRDNFRFLEDAIKQLK
Q851X6|Q851X6_EEEEE-206-257 RFADDAYRNALKDRKK----------------------------------
CONSENSUS ELTMRAWMHTEENKRKTLQKSD------IAQAVSKTDTFDFLVDIVPQKE
.
Q13952|CBFC_HUMAN-44-117 -----
Q62725|CBFC_RAT-44-117 -----
O73745|O73745_XENLA-42-115 -----
Q7ZVY3|Q7ZVY3_BRARE-42-115 -----
P70353|CBFC_MOUSE-44-117 -----
O04033|O04033_ARATH-59-132 -----
Q9SNZ0|Q9SNZ0_ARATH-77-155 -----
Q8L4B2|Q8L4B2_ARATH-82-155 -----
Q9ZVL3|Q9ZVL3_ARATH-72-145 -----
O23636|O23636_ARATH-16-89 -----
Q9SGU4|Q9SGU4_ARATH-16-89 -----
Q8VY66|Q8VY66_ARATH-78-151 -----
Q9FMV5|Q9FMV5_ARATH-80-163 IKEEE
Q9SMP0|Q9SMP0_ARATH-67-140 -----
Q8LCG7|Q8LCG7_ARATH-78-150 -----
Q9XE33|Q9XE33_ORYSA-92-165 -----
Q02516|HAP5_YEAST-161-234 -----
O13381|O13381_NEUCR-84-167 -----
Q96WN9|Q96WN9_TRIRE-84-167 -----
O59849|O59849_ASPOR-83-166 -----
P87092|P87092_EMENI-83-166 -----
P79007|PHP5_SCHPO-98-185 -----
Q9W3V9|Q9W3V9_DROME-155-228 -----
Q9FGP7|Q9FGP7_ARATH-56-129 -----
Q8SSZ4|Q8SSZ4_DICDI-272-345 -----
Q8SRY9|Q8SRY9_ENCCU-35-115 -----
Q8IL74|Q8IL74_PLAF7-36-118 R----
Q9FGP6|Q9FGP6_ARATH-37-110 -----
Q9FF42|Q9FF42_ARATH-66-145 -----
O17072|O17072_CAEEL-111-185 -----
Q9FGP8|Q9FGP8_ARATH-64-144 -----
Q8LMX6|Q8LMX6_EEEEE-53-127 -----
Q8W099|Q8W099_ORYSA-45-118 -----
Q93VF0|Q93VF0_ORYSA-45-118 -----
Q9NR33|DPE4_HUMAN-38-112 -----
Q9CQ36|DPE4_MOUSE-37-113 -----
Q8MSF2|Q8MSF2_DROME-52-127 -----
Q9W256|Q9W256_DROME-74-149 -----
Q9NAC5|Q9NAC5_CAEEL-34-109 -----
Q86HI1|Q86HI1_DICDI-80-151 -----
P40096|NCB1_YEAST-51-125 -----
Q13448|Q13448_HUMAN-4-74 -----
Q14919|Q14919_HUMAN-3-86 -----
Q9D6N5|Q9D6N5_MOUSE-3-86 -----
Q7ZVI1|Q7ZVI1_BRARE-3-86 -----
Q9GSP1|Q9GSP1_DROME-3-86 -----
Q9W2E3|Q9W2E3_DROME-3-86 -----
Q8W0W6|Q8W0W6_MAIZE-2-80 -----
Q8W0W7|Q8W0W7_ORYSA-2-80 -----
Q9LHG0|Q9LHG0_ARATH-2-83 -----
Q9C7A7|Q9C7A7_ARATH-16-87 -----
Q10315|YD63_SCHPO-22-98 -----
Q8MLV5|Q8MLV5_DROME-1-66 -----
Q8SQT6|Q8SQT6_ENCCU-10-93 -----
Q20237|Q20237_CAEEL-68-140 -----
Q86G95|Q86G95_CAEEL-42-114 -----
Q9FHS0|Q9FHS0_ARATH-12-86 -----
Q9LGS9|Q9LGS9_ORYSA-167-241 -----
Q9NRG0|CHR1_HUMAN-19-97 -----
Q9JKP8|CHR1_MOUSE-19-97 -----
Q9V452|Q9V452_DROME-20-101 R----
Q9LN09|Q9LN09_ARATH-104-188 -----
P27344|DPB3_YEAST-6-95 -----
Q851X6|Q851X6_EEEEE-206-257 -----
CONSENSUS RKEEE
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